STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101067188Protein tyrosine phosphatase receptor type Sa. (1921 aa)    
Predicted Functional Partners:
SLITRK1
SLIT and NTRK like family member 1.
    
 0.962
slitrk2
SLIT and NTRK-like family, member 2.
    
 0.961
slitrk5
SLIT and NTRK-like family, member 5a.
    
 0.942
slitrk4
SLIT and NTRK-like family, member 4.
    
  0.929
slitrk6
SLIT and NTRK-like family, member 6.
    
  0.929
LOC101076705
SLIT and NTRK-like family, member 5b.
    
  0.903
ENSTRUP00000008647
Receptor-type tyrosine-protein phosphatase S-like isoform X1.
  
  
 
0.901
il1rap
Interleukin 1 receptor accessory protein.
    
 0.806
LOC101074083
Tyrosine-protein kinase receptor.
    
 0.625
LOC101075204
Leucine rich repeat and fibronectin type III domain containing 4b.
    
 0.602
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.