STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101067188Protein tyrosine phosphatase receptor type Sa. (1921 aa)    
Predicted Functional Partners:
il1rap
Interleukin 1 receptor accessory protein.
    
 0.724
SLITRK1
SLIT and NTRK like family member 1.
    
 0.704
ntrk3
Neurotrophic tyrosine kinase, receptor, type 3b; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.693
LOC101074083
Tyrosine-protein kinase receptor.
    
 0.649
slitrk2
SLIT and NTRK-like family, member 2.
    
 0.628
LOC101078202
Tyrosine-protein kinase receptor.
   
 0.598
ntrk1
Tyrosine-protein kinase receptor.
   
 0.598
ENSTRUP00000063292
BDNF/NT-3 growth factors receptor-like isoform X1.
   
 0.598
H2TI00_TAKRU
Tyrosine-protein kinase receptor.
   
0.598
LOC101061514
Leucine rich repeat and fibronectin type III domain containing 5b.
    
 0.548
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.