STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2TRS2_TAKRUDexi homolog (mouse). (94 aa)    
Predicted Functional Partners:
wipf2
WAS/WASL interacting protein family, member 2a.
      
 0.793
mrpl45
Mitochondrial ribosomal protein L45.
      
 0.752
clec16a
C-type lectin domain containing 16A.
      
 0.738
mcfd2
Multiple coagulation factor deficiency 2.
      
 0.734
ciita
NACHT domain-containing protein.
      
 0.720
ttc7a
Tetratricopeptide repeat domain 7A.
      
 0.715
trappc13
Trafficking protein particle complex 13.
      
 0.705
Mrps28
Mitochondrial ribosomal protein S28.
      
 0.704
trmt9b
tRNA methyltransferase 9B.
      
 0.701
twf2
WD repeat domain 82.
      
 0.698
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.