Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
man2b1Alpha-mannosidase. (995 aa)    
Predicted Functional Partners:
man2b2
Glyco_hydro_38N domain-containing protein.
     
0.902
tectb
Tectorin beta.
      
 0.732
slc6a5
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.716
wbp2nl
WBP2 N-terminal like.
      
 0.688
siae
Sialic acid acetylesterase.
    
 
 0.669
gla
Alpha-galactosidase.
   
 
 0.654
naga
Alpha-galactosidase.
   
 
 0.654
manba
Glyco_hydro_2_N domain-containing protein.
   
 
 0.650
NAAA
N-acylethanolamine acid amidase; Belongs to the acid ceramidase family.
    
 
 0.640
LOC101073419
Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b.
   
  
 0.621
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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