STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
myf6Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). (239 aa)    
Predicted Functional Partners:
LOC101079401
Transcription factor 3a.
    
 0.766
tcf3
Transcription factor 3b.
    
 0.766
tcf12
Transcription factor 12.
    
 0.766
TCF4
Transcription factor 4.
    
 0.766
mef2b
Myocyte enhancer factor 2b.
    
 0.760
id2
Inhibitor of DNA binding 2a.
    
 
 0.754
dlx5
Homeobox domain-containing protein.
      
 0.733
mef2d
Myocyte enhancer factor 2d.
    
 0.714
MEF2D
Myocyte enhancer factor 2D.
    
 0.714
mef2c
Myocyte enhancer factor 2cb.
    
 0.698
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.