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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myf6Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). (239 aa)    
Predicted Functional Partners:
mef2b
Myocyte enhancer factor 2b.
    
 0.694
myog
Myogenin.
  
 
0.658
LOC101072332
Transcription factor 12-like.
   
 0.650
LOC101079401
Transcription factor 3a.
   
 0.650
tcf3
Transcription factor 3b.
   
 0.650
tcf12
Transcription factor 12.
   
 0.650
TCF4
Transcription factor 4.
   
 0.650
MYOZ1
Myozenin 1.
   
  
 0.638
mef2d
Myocyte enhancer factor 2d.
    
 0.635
MEF2D
Myocyte enhancer factor 2D.
    
 0.635
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.