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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101063757Uncharacterized protein. (1426 aa)    
Predicted Functional Partners:
ENSTRUP00000027404
annotation not available
 
      0.899
ENSTRUP00000049742
Cnn_1N domain-containing protein.
 
      0.696
ENSTRUP00000051420
Cnn_1N domain-containing protein.
 
      0.659
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.572
mettl11b
Methyltransferase like 11B.
      
 0.566
kifap3
Kinesin-associated protein 3b.
      
 0.566
ENSTRUP00000060167
Uncharacterized protein.
    
 0.496
akap9
PACT_coil_coil domain-containing protein.
    
 0.496
LOC101080183
A-kinase anchor protein 9-like isoform X1.
    
 0.496
plk3
Serine/threonine-protein kinase PLK.
   
 0.466
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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