STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101063757Uncharacterized protein. (1426 aa)    
Predicted Functional Partners:
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 0.950
ENSTRUP00000027404
annotation not available
 
      0.899
ENSTRUP00000060167
Uncharacterized protein.
   
 0.804
akap9
PACT_coil_coil domain-containing protein.
   
 0.804
LOC101080183
A-kinase anchor protein 9-like isoform X1.
   
 0.804
mettl11b
Methyltransferase like 11B.
      
 0.721
kifap3
Kinesin-associated protein 3b.
      
 0.716
ENSTRUP00000049742
Cnn_1N domain-containing protein.
 
      0.696
ENSTRUP00000051420
Cnn_1N domain-containing protein.
 
      0.659
LOC101066292
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 
 0.632
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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