Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101075138Sarcolemma associated protein b. (370 aa)    
Predicted Functional Partners:
pdcd10
Programmed cell death 10b.
   
 
 0.855
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.843
LOC101078365
MOB family member 4, phocein.
    
 
 0.815
ENSTRUP00000050399
annotation not available
    
 0.803
cenpp
Centromere protein P.
    
 0.802
abhd6
Abhydrolase domain containing 6b.
   
 
 0.761
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.759
strip2
Striatin interacting protein 2.
    
 
 0.739
LOC101063238
Striatin interacting protein 1.
    
 
 0.739
H2U666_TAKRU
Uncharacterized protein.
      
 0.710
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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