Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101071687USP domain-containing protein; Belongs to the peptidase C19 family. (336 aa)    
Predicted Functional Partners:
mx1
Myxovirus (influenza) resistance A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.965
rsad2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.963
skp2
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
    
 
 0.945
map3k7
Mitogen-activated protein kinase kinase kinase 7.
    
  0.914
trip12
Thyroid hormone receptor interactor 12.
   
 
 0.897
cmpk2
Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.
   
  
 0.884
dhx58
DEXH (Asp-Glu-X-His) box polypeptide 58.
   
 
 0.879
irf7
Interferon regulatory factor 7.
   
 0.869
ifih1
Interferon induced with helicase C domain 1.
   
 
 0.862
LOC101064437
IFI56.
   
 0.835
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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