STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
haus5HAUS augmin-like complex, subunit 5. (656 aa)    
Predicted Functional Partners:
Haus3
HAUS augmin-like complex, subunit 3.
   
 0.990
haus8
Si:ch211-153a8.4.
    
 0.983
haus2
Uncharacterized protein.
    
 0.981
haus1
HAUS augmin-like complex, subunit 1.
   
 0.979
haus7
HAUS augmin-like complex subunit 7 isoform X1.
    
 0.975
haus4
HAUS augmin-like complex, subunit 4.
   
 0.943
snrpf
Small nuclear ribonucleoprotein polypeptide F.
    
 0.791
SART1
Squamous cell carcinoma antigen recognised by cytotoxic T lymphocytes.
   
 0.781
prpf31
PRP31 pre-mRNA processing factor 31 homolog (yeast).
   
 0.722
usp39
Ubiquitin specific peptidase 39.
    
  0.718
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.