STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPZCarboxypeptidase Z. (728 aa)    
Predicted Functional Partners:
LOC101077779
Uncharacterized protein.
    
 0.605
agmo
Alkylglycerol monooxygenase; Belongs to the sterol desaturase family.
      
 0.555
spcs1
Signal peptidase complex subunit 1.
      
 0.514
Crppa
D-ribitol-5-phosphate cytidylyltransferase isoform X1.
      
 0.445
mfrp
Membrane frizzled-related protein.
      
 0.440
l3hypdh
Trans-L-3-hydroxyproline dehydratase.
    
   0.417
sorcs2
Sortilin-related VPS10 domain containing receptor 2.
     
 0.406
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.