STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)    
Predicted Functional Partners:
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
   
 0.999
gps1
G protein pathway suppressor 1.
   
 0.997
cops3
COP9 signalosome subunit 3.
    
 0.997
COPS6
COP9 signalosome subunit 6.
    
 0.996
cops2
COP9 signalosome subunit 2.
    
 0.992
cops8
COP9 signalosome subunit 8.
    
 0.992
arfgef1-2
ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited).
    
 0.987
ppp1r42
Protein phosphatase 1, regulatory subunit 42.
    
 0.971
LOC101077379
NEDD8 ubiquitin like modifier.
    
 0.883
H2SH60_TAKRU
Ubiquitin-like domain-containing protein.
    
 0.883
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.