Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gpaa1Glycosylphosphatidylinositol anchor attachment 1. (600 aa)    
Predicted Functional Partners:
pigu
Phosphatidylinositol glycan anchor biosynthesis, class U.
   
 0.999
pigt
Phosphatidylinositol glycan anchor biosynthesis, class T.
   
 0.999
pigs
Phosphatidylinositol glycan anchor biosynthesis, class S.
   
 0.999
pigk
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.999
pgap1
GPI inositol-deacylase isoform X1.
     
 0.954
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
   
 0.954
pglyrp2
Peptidoglycan recognition protein 2.
   
 0.937
pigf
Phosphatidylinositol glycan anchor biosynthesis, class F.
   
 
 0.922
pigv
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 
 0.827
pigc
Phosphatidylinositol glycan anchor biosynthesis, class C.
      
 0.798
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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