Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101076147Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
rock1
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
    
 0.977
rock2
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
    
 0.976
daam1
Dishevelled associated activator of morphogenesis 1b.
    
 0.975
arhgap35
Uncharacterized protein.
    
 0.971
LOC101068709
Rho GTPase activating protein 35b.
    
 0.971
arhgef12
Rho guanine nucleotide exchange factor (GEF) 12a.
   
 0.971
arhgef11
PDZ domain-containing protein.
   
 0.971
arhgef1
DH domain-containing protein.
   
 0.971
arhgef2
Uncharacterized protein.
   
 0.968
ARHGEF2
Rho guanine nucleotide exchange factor 2-like.
   
 0.968
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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