STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ice2Interactor of little elongator complex ELL subunit 2. (893 aa)    
Predicted Functional Partners:
ice1
Uncharacterized protein.
   
 0.932
ENSTRUP00000059044
annotation not available
   
 0.932
ell
Elongation factor RNA polymerase II.
    
 0.916
ell2
Elongation factor, RNA polymerase II, 2.
    
 0.857
LOC101072365
Uncharacterized protein.
    
 0.857
LOC101080126
Si:ch211-13k12.2.
    
 0.857
LOC101062747
Uncharacterized protein.
    
 0.831
ENSTRUP00000070492
annotation not available
    
 0.831
ENSTRUP00000069471
RNA polymerase II associated protein 2.
   
 
 0.818
eaf1
ELL associated factor 1.
    
 
 0.788
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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