STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101068848Cytoplasmic polyadenylation element binding protein 4a. (744 aa)    
Predicted Functional Partners:
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.911
LOC101064374
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.906
LOC101074416
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 
 0.903
LOC101076205
Cyclin B2; Belongs to the cyclin family.
   
 
 0.903
LOC101065671
Cyclin N-terminal domain containing 2; Belongs to the cyclin family.
   
 
 0.903
pin4
Peptidyl-prolyl cis-trans isomerase.
    
 
 0.723
rnf44
Ring finger protein 44.
      
 0.719
faf2
Fas associated factor family member 2.
      
 0.548
LOC101070515
Netrin-1-like.
      
 0.531
LOC101065496
Netrin 2.
      
 0.531
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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