STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101070874Vang-like protein. (539 aa)    
Predicted Functional Partners:
dvl3
Dishevelled segment polarity protein 3a.
    
 0.961
dvl2
Dishevelled segment polarity protein 2.
    
 0.961
dvl1
Dishevelled segment polarity protein 1a.
    
 0.961
prickle2
Prickle homolog 2b.
    
 0.946
LOC101073257
Prickle homolog 2a.
    
 0.942
PRICKLE1
Prickle homolog 1a.
    
 0.942
LOC101071385
Uncharacterized protein.
    
 0.942
fzd2
Frizzled class receptor 2; Belongs to the G-protein coupled receptor Fz/Smo family.
   
 0.701
gldn
Gliomedin.
      
 0.632
ENSTRUP00000057963
annotation not available
    
 0.630
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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