STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101076381IFI30 lysosomal thiol reductase. (242 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
   0.669
c3h1orf194
Uncharacterized protein.
   
   0.508
pacrg
PARK2 co-regulated.
    
   0.504
efhb
Uncharacterized protein.
    
   0.504
ENSTRUP00000051128
Uncharacterized protein.
    
   0.504
ENSTRUP00000053744
Uncharacterized protein.
    
   0.504
LOC115250255
Sperm-associated antigen 8-like.
    
   0.504
LOC101064437
IFI56.
    
 
 0.498
aass
Aminoadipate-semialdehyde synthase.
      
 0.485
mx1
Myxovirus (influenza) resistance A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.476
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.