STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101071414Zgc:92313; Belongs to the peptidase S1 family. (307 aa)    
Predicted Functional Partners:
LOC101075979
PDZ domain containing 3b.
     
 0.604
ENSTRUP00000073805
Na(+)/H(+) exchange regulatory cofactor NHE-RF3-like isoform X1.
     
 0.604
LOC101075035
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
   
  
 0.479
LOC101067379
Uncharacterized protein.
   
  
 0.479
LOC101061845
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.474
agt
Angiotensinogen; Belongs to the serpin family.
   
 0.455
LOC101069540
Uncharacterized protein; Belongs to the peptidase S1 family.
    
 0.451
LOC115250384
RRNA small subunit pseudouridine methyltransferase Nep1.
      
 0.445
LOC101066424
EMG1 N1-specific pseudouridine methyltransferase.
      
 0.445
scf
Uncharacterized protein.
     
 0.419
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.