STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctddCMP deaminase. (184 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
  
 
 0.984
tk1
Thymidine kinase.
  
 
 0.981
LOC101076531
Thymidylate kinase.
    
 0.964
LOC115247266
Deoxythymidylate kinase (thymidylate kinase).
    
 0.964
dut
Deoxyuridine triphosphatase.
  
 0.962
cmpk2
Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.
    
 0.959
LOC115248709
Thymidine kinase 2.
   
 0.950
dck
Deoxycytidine kinase.
   
 0.948
Dctpp1
dCTP pyrophosphatase 1; Hydrolyzes deoxynucleoside triphosphates (dNTPs) to the corresponding nucleoside monophosphates. Has a strong preference for dCTP and its analogs including 5-iodo-dCTP and 5-methyl-dCTP for which it may even have a higher efficiency. May protect DNA or RNA against the incorporation of these genotoxic nucleotide analogs through their catabolism.
   
 0.926
LOC101078071
5'-nucleotidase, cytosolic IIa.
     
 0.920
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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