STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stradaSTE20 related adaptor alpha. (469 aa)    
Predicted Functional Partners:
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
   
 0.983
prkaa1
Non-specific serine/threonine protein kinase.
   
0.949
prkaa2
Non-specific serine/threonine protein kinase.
   
0.949
LOC101070221
Calcium binding protein 39, like 1.
    
 0.946
cab39l
Calcium binding protein 39-like.
    
 0.946
STRADB
STE20 related adaptor beta.
  
  
 
0.902
cab39
Calcium binding protein 39.
    
 0.743
sec61g
SEC61 translocon gamma subunit.
   
 
 0.725
sec62
SEC62 homolog, preprotein translocation factor.
    
 
 0.720
Sec61b
Uncharacterized protein.
    
 
 0.616
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.