Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101069989Myosin IG; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1010 aa)    
Predicted Functional Partners:
baz1b
Bromodomain adjacent to zinc finger domain, 1B.
    
  0.715
myo1c
Myosin Ic, paralog b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.686
LOC101068929
TH1 domain-containing protein.
   
 
 0.686
ENSTRUP00000008077
Calmodulin 1b.
    
 0.640
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.640
calm2-2
Calmodulin 3.
    
 0.640
LOC101064505
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.640
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
  0.627
polr1e
RNA polymerase I subunit E.
    
  0.591
PLEKHH3
Pleckstrin homology, MyTH4 and FERM domain containing H3.
 
  
 0.585
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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