STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPDEFSAM pointed domain containing ETS transcription factor. (319 aa)    
Predicted Functional Partners:
tipin
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
      
 0.652
GALNT3
Polypeptide N-acetylgalactosaminyltransferase.
   
  
 0.578
gcnt3
Glucosaminyl (N-acetyl) transferase 3, mucin type.
      
 0.574
LOC101065469
Forkhead box E3.
    
 
 0.506
c6h5orf30
Zgc:194281.
    
   0.497
marcks
Myristoylated alanine-rich protein kinase C substrate a.
      
 0.496
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
      
 0.475
agr2
Anterior gradient 2.
   
  
 0.471
calm2-2
Calmodulin 3.
      
 0.450
H2T6G5_TAKRU
PHD-type domain-containing protein.
      
 0.426
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.