STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KCNS2Potassium voltage-gated channel modifier subfamily S member 2; Belongs to the potassium channel family. (479 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.794
MATN2
Matrilin 2.
    
 
 0.704
ENSTRUP00000046456
Matrilin 3a.
    
 
 0.704
LOC101078847
Phosphatidylserine synthase 1b.
      
 0.701
pum2
Pumilio RNA-binding family member 2.
      
 0.701
LOC105419563
Potassium voltage-gated channel delayed-rectifier subfamily S member 1.
    
  0.645
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.583
fscn1
Fascin.
      
 0.580
LOC101076800
Fascin.
      
 0.580
LOC101061207
Fascin.
      
 0.580
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.