STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tln1Talin 1. (2471 aa)    
Predicted Functional Partners:
vcl
Vinculin b.
   
 0.990
itgb4
Integrin beta.
   
 0.918
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.918
itgb8
Integrin beta; Belongs to the integrin beta chain family.
   
 0.914
LOC101075584
Integrin beta; Belongs to the integrin beta chain family.
   
 0.907
LOC101064754
Uncharacterized protein; Belongs to the peptidase C2 family.
    
 0.906
LOC101076595
Calpain 2, (m/II) large subunit b; Belongs to the peptidase C2 family.
    
 0.906
tln2
Talin 2b.
  
  
0.904
LOC101067303
Integrin beta; Belongs to the integrin beta chain family.
   
 0.870
LOC101061453
Integrin beta; Belongs to the integrin beta chain family.
   
 0.870
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.