mct4a protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

mct4a

MFS domain-containing protein. (535 aa)

Predicted Functional Partners:

emb

0.760

bsg

0.612

apex1

0.571

agl

0.542

mcts1

0.509

tspan10

0.475

ncoa1

0.458

ENSTRUP00000069008

0.458

slc45a2

0.444

kcnj13

0.426

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000069008	agl	ENSTRUP00000069008	ENSTRUP00000075999	Nuclear receptor coactivator 1-like.	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.	0.450
ENSTRUP00000069008	apex1	ENSTRUP00000069008	ENSTRUP00000010123	Nuclear receptor coactivator 1-like.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.457
ENSTRUP00000069008	mct4a	ENSTRUP00000069008	ENSTRUP00000028110	Nuclear receptor coactivator 1-like.	MFS domain-containing protein.	0.458
agl	ENSTRUP00000069008	ENSTRUP00000075999	ENSTRUP00000069008	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.	Nuclear receptor coactivator 1-like.	0.450
agl	apex1	ENSTRUP00000075999	ENSTRUP00000010123	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.542
agl	mct4a	ENSTRUP00000075999	ENSTRUP00000028110	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.	MFS domain-containing protein.	0.542
agl	ncoa1	ENSTRUP00000075999	ENSTRUP00000016271	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.	Nuclear receptor coactivator 1.	0.450
apex1	ENSTRUP00000069008	ENSTRUP00000010123	ENSTRUP00000069008	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Nuclear receptor coactivator 1-like.	0.457
apex1	agl	ENSTRUP00000010123	ENSTRUP00000075999	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.	0.542
apex1	mct4a	ENSTRUP00000010123	ENSTRUP00000028110	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	MFS domain-containing protein.	0.571
apex1	ncoa1	ENSTRUP00000010123	ENSTRUP00000016271	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Nuclear receptor coactivator 1.	0.457
bsg	mct4a	ENSTRUP00000046265	ENSTRUP00000028110	Basigin.	MFS domain-containing protein.	0.612
emb	mct4a	ENSTRUP00000043095	ENSTRUP00000028110	Embigin.	MFS domain-containing protein.	0.760
emb	mcts1	ENSTRUP00000043095	ENSTRUP00000024311	Embigin.	Malignant T-cell-amplified sequence.	0.447
kcnj13	mct4a	ENSTRUP00000004189	ENSTRUP00000028110	Potassium inwardly-rectifying channel, subfamily J, member 13.	MFS domain-containing protein.	0.426
mct4a	ENSTRUP00000069008	ENSTRUP00000028110	ENSTRUP00000069008	MFS domain-containing protein.	Nuclear receptor coactivator 1-like.	0.458
mct4a	agl	ENSTRUP00000028110	ENSTRUP00000075999	MFS domain-containing protein.	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.	0.542
mct4a	apex1	ENSTRUP00000028110	ENSTRUP00000010123	MFS domain-containing protein.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.571
mct4a	bsg	ENSTRUP00000028110	ENSTRUP00000046265	MFS domain-containing protein.	Basigin.	0.612
mct4a	emb	ENSTRUP00000028110	ENSTRUP00000043095	MFS domain-containing protein.	Embigin.	0.760