Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gtpbp6GTP binding protein 6 (putative). (518 aa)    
Predicted Functional Partners:
mtg2
Mitochondrial ribosome-associated GTPase 2.
  
  
 0.893
mrpl9
Mitochondrial ribosomal protein L9.
   
 
 0.821
RPL27A
Ribosomal protein L27a.
   
 
 0.810
rpl13a
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
    
 
 0.808
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.787
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.768
rpl23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.767
mrpl58
Mitochondrial ribosomal protein L58.
    
 
 0.764
mrpl32
Mitochondrial ribosomal protein L32.
    
 
 0.763
gtpbp10
GTP-binding protein 10 (putative).
  
  
 0.762
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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