Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
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[Homology]
Score
gkap1G kinase anchoring protein 1. (381 aa)    
Predicted Functional Partners:
stk36
Serine/threonine kinase 36 (fused homolog, Drosophila).
   
 0.881
smo
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
   
 0.831
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.771
sufu
Suppressor of fused homolog.
    
 0.739
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.737
ckap5
Cytoskeleton associated protein 5.
   
 0.734
gli2
Uncharacterized protein.
    
 0.660
gli1
GLI family zinc finger 1.
    
 0.660
gli3
GLI family zinc finger 3.
    
 0.660
LOC101077858
GLI family zinc finger 2b.
    
 0.660
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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