STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
faf2Fas associated factor family member 2. (445 aa)    
Predicted Functional Partners:
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.988
derl2
Derlin-2/3.
   
 
 0.985
ufd1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.976
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
 0.975
ubac2
UBA domain containing 2.
    
 
 0.973
ubxn1
UBX domain protein 1.
   
 
 0.967
bag6
BCL2 associated athanogene 6.
    
 
 0.950
pex19
Peroxisomal biogenesis factor 19.
    
 
 0.943
ubxn7
UBX domain protein 7.
   
 
 0.927
UBXN7
UBX domain protein 7.
   
 
 0.927
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.