Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
itih5Inter-alpha-trypsin inhibitor heavy chain 5. (968 aa)    
Predicted Functional Partners:
hoxd10
Homeobox protein Hox-D10a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Abd-B homeobox family.
    
 
 0.587
ogfod1
2-oxoglutarate and iron-dependent oxygenase domain containing 1.
   
  
 0.578
tmem231
Transmembrane protein 231.
      
 0.568
traf7
TNF receptor-associated factor 7.
   
 0.501
gramd1b
GRAM domain containing 1Bb.
    
 
 0.493
LOC101079283
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.489
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.466
mrrf
Ribosome-recycling factor, mitochondrial isoform X1.
      
 0.445
CDC37
Cell division cycle 37.
    
 0.443
cdc37l1
Cell division cycle 37-like 1.
    
 0.443
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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