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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nr4a3Nuclear receptor subfamily 4, group A, member 3. (777 aa)    
Predicted Functional Partners:
trip11
Thyroid hormone receptor interactor 11.
    
 
 0.640
trip4
Thyroid hormone receptor interactor 4.
      
 0.637
LOC101077966
Nuclear receptor coactivator 3.
    
 
 0.610
trip13
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
      
 0.592
LOC101068454
Uncharacterized protein.
    
 
 0.568
ncor2
Nuclear receptor corepressor 2.
    
 0.524
ncor1
Nuclear receptor corepressor 1.
    
 0.524
SERTAD2
SERTA domain-containing protein 2.
      
 0.509
trip12
Thyroid hormone receptor interactor 12.
      
 0.508
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 
 0.502
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.