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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
edem1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (638 aa)    
Predicted Functional Partners:
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
 0.821
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
    
 
 0.761
xbp1
X-box binding protein 1.
     
 0.733
LOC101070859
Calnexin.
   
 
 0.664
LOC101069714
Uncharacterized protein.
   
 
 0.664
derl2
Derlin-2/3.
   
 
 0.631
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 
 0.603
dnajc3
DnaJ (Hsp40) homolog, subfamily C, member 3a.
   
 
 0.595
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 
 0.573
mbtps2
Membrane-bound transcription factor peptidase, site 2.
      
 0.566
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.