STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stx4Syntaxin 4; Belongs to the syntaxin family. (297 aa)    
Predicted Functional Partners:
vamp4
Vesicle-associated membrane protein 4.
    
 0.965
snap23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.935
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.932
LOC101073763
V-SNARE coiled-coil homology domain-containing protein.
    
 0.901
LOC101069563
V-SNARE coiled-coil homology domain-containing protein.
   
 0.900
LOC101072029-2
Zgc:92912.
   
 0.900
ENSTRUP00000060597
Vesicle-associated membrane protein 3-like isoform X1.
    
 0.880
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.869
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.775
stxbp2
Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.761
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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