STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101073378Lysophosphatidylcholine acyltransferase 1. (498 aa)    
Predicted Functional Partners:
lpcat4
Lysophosphatidylcholine acyltransferase 4.
  
 
0.942
chpt1
Choline phosphotransferase 1.
     
 0.934
lpgat1
Lysophosphatidylglycerol acyltransferase 1.
     
 0.932
cept1
Choline/ethanolamine phosphotransferase 1b; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.924
lclat1
Lysocardiolipin acyltransferase 1.
     
 0.922
ENSTRUP00000080947
Cardiolipin synthase 1.
  
 
 0.922
pemt
Phosphatidylethanolamine N-methyltransferase; Catalyzes the three sequential steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylethanolamine (PE) to phosphatidylmonomethylethanolamine (PMME), PMME to phosphatidyldimethylethanolamine (PDME), and PDME to phosphatidylcholine (PC); Belongs to the class VI-like SAM-binding methyltransferase superfamily. PEMT/PEM2 methyltransferase family.
     
 0.915
LOC101078847
Phosphatidylserine synthase 1b.
   
 
 0.912
LOC101078762
Phosphatidylserine synthase 1a.
   
 
 0.912
pafah1b3
Platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit.
     
 0.911
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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