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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101068065Fructosamine 3 kinase related protein; Belongs to the fructosamine kinase family. (309 aa)    
Predicted Functional Partners:
snx13
Sorting nexin 13.
 
      0.849
tbcd
Tubulin folding cofactor D.
 
  
 0.625
adck1
AarF domain containing kinase 1.
  
  
 0.586
hspb1
Heat shock protein, alpha-crystallin-related, 1; Belongs to the small heat shock protein (HSP20) family.
   
  
 0.566
b3gntl1
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1.
      
 0.556
ciz1
Cdkn1a interacting zinc finger protein 1a.
   
  
 0.554
wdr18
WD repeat domain 18.
      
 0.504
vat1l
Vesicle amine transport 1-like.
  
  
 0.447
ano3
Anoctamin.
      
 0.437
CTXN1
Cortexin 1.
      
 0.436
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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