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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ranbp3RAN binding protein 3b. (523 aa)    
Predicted Functional Partners:
rcc1
Regulator of chromosome condensation 1.
    
 
 0.857
nxt2
Nuclear transport factor 2-like export factor 2.
     
 0.730
NUP62
Nucleoporin 62.
   
 
 0.724
rae1
Ribonucleic acid export 1.
   
 
 0.706
XPO1
Exportin 1 (CRM1 homolog, yeast) b.
    
 
 0.694
ENSTRUP00000083097
Exportin 1 (CRM1 homolog, yeast) b.
    
 
 0.694
nup50
Nucleoporin 50.
     
 0.684
ipo5
Karyopherin (importin) beta 3.
   
  
 0.659
exosc10
Exosome component 10.
   
    0.650
xpo7
Exportin 7.
    
 
 0.638
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.