Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2TV94_TAKRUUncharacterized protein. (97 aa)    
Predicted Functional Partners:
ENSTRUP00000049249
OCIA domain-containing protein.
      
 0.772
H2S785_TAKRU
Sorting nexin 20.
      
 0.727
LOC101075233
Parvin, alpha a.
      
 0.638
fstl4
Follistatin-like 4.
      
 0.547
fstl5
Follistatin-like 5.
      
 0.547
mpv17l2
MPV17 mitochondrial membrane protein-like 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.514
MPV17L2
MPV17 mitochondrial inner membrane protein like 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.514
rps7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
      
 0.513
mmgt1
Membrane magnesium transporter 1.
      
 0.513
LOC101069992
Cytochrome b5 type B; Belongs to the cytochrome b5 family.
      
 0.509
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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