STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ube2tUbiquitin-conjugating enzyme E2T (putative). (232 aa)    
Predicted Functional Partners:
fanci
FA complementation group I.
   
 0.997
fancl
FA complementation group L.
   
 0.997
fancf
FA complementation group F.
    
 0.993
fancc
FA complementation group C.
    
 0.993
FANCA
Fanconi anemia group A protein.
   
 0.992
fancg
Uncharacterized protein.
   
 0.991
FAAP100
Uncharacterized protein.
    
 0.986
Fancm
ERCC4 domain-containing protein.
    
 0.979
fance
FA complementation group E.
   
 0.973
fancb
FA complementation group B.
    
 0.953
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.