STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LGR6Leucine rich repeat containing G protein-coupled receptor 6. (950 aa)    
Predicted Functional Partners:
LOC101064242
R-spondin 1.
    
 0.962
rspo2
R-spondin 2.
    
 0.952
rspo3
R-spondin 3.
    
 0.929
lgr5
Leucine-rich repeat-containing G protein-coupled receptor 5.
  
 
0.927
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
  
 
0.926
LOC101071898
Follitropin subunit beta.
   
 0.851
ENSTRUP00000081133
Thyroid stimulating hormone subunit beta a.
    
 0.754
H2SP25_TAKRU
Glycoprotein hormone subunit beta 5.
     
 0.697
LOC101072209
Si:dkey-23i12.9.
     
 0.697
rnf43
RING-type domain-containing protein.
    
 0.684
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.