STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptbp1Polypyrimidine tract binding protein 1a. (562 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.891
hnrnpc
RRM domain-containing protein.
   
 0.889
LOC101076991
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.835
Raver2
Ribonucleoprotein PTB-binding 2 isoform X1.
   
 0.817
H2RPD9_TAKRU
RRM domain-containing protein.
   
 0.795
ENSTRUP00000075247
annotation not available
   
 0.795
hnrnpl
Heterogeneous nuclear ribonucleoprotein L.
   
 0.795
srsf7
Serine and arginine rich splicing factor 7a.
   
 
 0.751
LOC101076059
Uncharacterized protein.
   
 0.745
LOC101066421
Heterogeneous nuclear ribonucleoprotein D.
   
 0.745
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (44%) [HD]