STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bend7Si:ch211-220f12.4. (460 aa)    
Predicted Functional Partners:
smim12
Small integral membrane protein 12.
      
 0.775
rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
      
 0.738
BEND4
BEN domain containing 4.
      
 0.730
LOC101065706
C1q domain-containing protein.
      
 0.717
tcaim
T cell activation inhibitor, mitochondrial.
      
 0.705
bend3
BEN domain containing 3.
      
 0.703
lrrc40
Leucine rich repeat containing 40.
      
 0.702
banp
BTG3 associated nuclear protein.
      
 0.701
snapc3
Small nuclear RNA activating complex, polypeptide 3.
      
 0.654
optn
Optineurin.
      
 0.654
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.