STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101071876Guanine nucleotide binding protein (G protein), alpha 13b. (378 aa)    
Predicted Functional Partners:
arhgef12
Rho guanine nucleotide exchange factor (GEF) 12a.
    
 0.978
arhgef11
PDZ domain-containing protein.
    
 0.978
arhgef1
DH domain-containing protein.
    
 0.978
LOC101079659
Adrenoceptor alpha 1Ab.
    
 0.967
f2r
Coagulation factor II (thrombin) receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.951
LOC101066071
Adrenoceptor alpha 1D.
   
 0.946
adra1b
Adrenoceptor alpha 1Bb.
    
 0.945
LOC101063369
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 0.945
LOC101075588
Lysophosphatidic acid receptor 1; Belongs to the G-protein coupled receptor 1 family.
    
 0.937
LOC101078555
Lysophosphatidic acid receptor 2; Belongs to the G-protein coupled receptor 1 family.
    
 0.926
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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