Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A3Uncharacterized protein. (312 aa)    
Predicted Functional Partners:
LOC101078409
Sorting and assembly machinery component 50 homolog, like.
    
 
 0.740
mtx3
Metaxin.
   
 
 0.735
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 
 0.691
LOC101069036
Uncharacterized protein.
   
 0.688
SLC39A11
Solute carrier family 39 member 11.
   
 0.625
phb
Prohibitin.
    
 
 0.604
LOC101076312
Solute carrier family 39 member 7.
   
 0.590
SLC39A12
Solute carrier family 39 member 12.
   
 0.585
ENSTRUP00000087740
annotation not available
   
 0.585
slc39a13
Solute carrier family 39 member 13.
   
 0.572
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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