STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tomm70Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (612 aa)    
Predicted Functional Partners:
tomm22
Translocase of outer mitochondrial membrane 22 homolog (yeast).
   
 0.998
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.997
prkn
Ubiquitin-like domain-containing protein.
    
 0.996
tomm5
Translocase of outer mitochondrial membrane 5 homolog (yeast).
    
 0.992
tomm6
Translocase of outer mitochondrial membrane 6 homolog (yeast).
    
 0.992
tomm20
Translocase of outer mitochondrial membrane 20b.
   
 0.991
TOMM20
Uncharacterized protein.
   
 0.991
LOC101061276
Translocase of outer mitochondrial membrane 40 homolog, like.
   
 0.981
TOMM40
Mitochondrial import receptor subunit TOM40 homolog.
   
 0.981
LOC101070918
Uncharacterized protein.
   
 0.981
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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