Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pterPhosphotriesterase related. (349 aa)    
Predicted Functional Partners:
pop5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
  
 0.677
dhx40
DEAH (Asp-Glu-Ala-His) box polypeptide 40.
   
 
 0.643
asb12
Ankyrin repeat and SOCS box-containing 12b.
    
 0.636
lrat
Lecithin retinol acyltransferase a.
      
 0.630
sil1
SIL1 nucleotide exchange factor.
      
 0.604
ttc12
TPR_REGION domain-containing protein.
   
 0.593
surf4
Surfeit locus protein 4; Belongs to the SURF4 family.
     
 0.587
LOC101078882
Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.
      
 0.586
dram2
DNA-damage regulated autophagy modulator 2b.
      
 0.579
dram1
DNA-damage regulated autophagy modulator 1.
      
 0.579
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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