Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fopnlFgfr1op N-terminal like. (150 aa)    
Predicted Functional Partners:
ofd1
OFD1 centriole and centriolar satellite protein.
   
 
 0.967
pcm1
Pericentriolar material 1 protein.
    
 
 0.911
kiaa0753
Si:dkey-243i1.1.
    
 
 0.887
LOC101062944
Homeobox domain-containing protein.
    
   0.790
LOC101067138
Goosecoid.
    
   0.790
pibf1
Progesterone immunomodulatory binding factor 1.
   
 
 0.758
ccdc138
Uncharacterized protein.
      
 0.733
Cep350
Centrosomal protein 350.
      
 0.705
MARF1
Meiosis regulator and mRNA stability factor 1.
      
 0.705
c2cd3
C2 domain containing 3 centriole elongation regulator.
      
 0.704
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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