STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sncbBeta-synuclein; Belongs to the synuclein family. (117 aa)    
Predicted Functional Partners:
SNCA
Uncharacterized protein; Belongs to the synuclein family.
   
 
 0.968
sncg
Gamma-synuclein; Belongs to the synuclein family.
   
 
0.866
sncaip
Synuclein, alpha interacting protein.
    
 
 0.829
unc5a
Unc-5 netrin receptor A.
   
  
 0.793
LOC101079930
Complexin 2.
   
  
 0.646
slc30a9
Solute carrier family 30 member 9.
      
 0.587
LOC101073159
HIG1 hypoxia inducible domain family, member 2A.
      
 0.584
vdac1
Voltage-dependent anion channel 1.
      
 0.530
selenbp1
Selenium binding protein 1.
      
 0.485
faf2
Fas associated factor family member 2.
      
 0.462
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.