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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101068135Prokineticin receptor 1b; Belongs to the G-protein coupled receptor 1 family. (405 aa)    
Predicted Functional Partners:
ENSTRUP00000050925
Prokineticin 2.
     
 0.770
prok1
Prokineticin 1.
     
 0.728
LOC115249042
Uncharacterized protein.
    
 0.597
ENSTRUP00000053645
annotation not available
    
  0.566
edn1
Endothelin 1.
    
  0.565
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
      
 0.544
ENSTRUP00000065811
annotation not available
      
 0.544
frem1
Fras1 related extracellular matrix 1a.
      
 0.542
LOC101068989
Angiotensin II receptor, type 2; Belongs to the G-protein coupled receptor 1 family.
   
 
 
0.509
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
  0.491
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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