rsad1 protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

rsad1

Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (451 aa)

Predicted Functional Partners:

fau

0.998

H2TER7_TAKRU

0.992

Rps26

0.990

rps18

0.990

rps19

0.990

rps27a

0.989

rps9

0.989

rps16

0.989

rps3

0.989

rps11

0.989

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2TER7_TAKRU	Rps26	ENSTRUP00000023160	ENSTRUP00000030482	Ribosomal protein S28.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
H2TER7_TAKRU	fau	ENSTRUP00000023160	ENSTRUP00000029977	Ribosomal protein S28.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
H2TER7_TAKRU	rps11	ENSTRUP00000023160	ENSTRUP00000068429	Ribosomal protein S28.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.999
H2TER7_TAKRU	rps16	ENSTRUP00000023160	ENSTRUP00000061221	Ribosomal protein S28.	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.999
H2TER7_TAKRU	rps18	ENSTRUP00000023160	ENSTRUP00000034159	Ribosomal protein S28.	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.999
H2TER7_TAKRU	rps19	ENSTRUP00000023160	ENSTRUP00000057976	Ribosomal protein S28.	Ribosomal protein S19.	0.999
H2TER7_TAKRU	rps27a	ENSTRUP00000023160	ENSTRUP00000027679	Ribosomal protein S28.	Ribosomal protein S27a.	0.999
H2TER7_TAKRU	rps3	ENSTRUP00000023160	ENSTRUP00000065252	Ribosomal protein S28.	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.999
H2TER7_TAKRU	rps9	ENSTRUP00000023160	ENSTRUP00000040636	Ribosomal protein S28.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.999
H2TER7_TAKRU	rsad1	ENSTRUP00000023160	ENSTRUP00000029217	Ribosomal protein S28.	Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family.	0.992
Rps26	H2TER7_TAKRU	ENSTRUP00000030482	ENSTRUP00000023160	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Ribosomal protein S28.	0.999
Rps26	fau	ENSTRUP00000030482	ENSTRUP00000029977	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
Rps26	rps11	ENSTRUP00000030482	ENSTRUP00000068429	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.999
Rps26	rps16	ENSTRUP00000030482	ENSTRUP00000061221	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.999
Rps26	rps18	ENSTRUP00000030482	ENSTRUP00000034159	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.999
Rps26	rps19	ENSTRUP00000030482	ENSTRUP00000057976	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Ribosomal protein S19.	0.999
Rps26	rps27a	ENSTRUP00000030482	ENSTRUP00000027679	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Ribosomal protein S27a.	0.999
Rps26	rps3	ENSTRUP00000030482	ENSTRUP00000065252	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.999
Rps26	rps9	ENSTRUP00000030482	ENSTRUP00000040636	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.999
Rps26	rsad1	ENSTRUP00000030482	ENSTRUP00000029217	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family.	0.990

page 1 of 6

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About