STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101063381Vitamin D receptor b. (440 aa)    
Predicted Functional Partners:
ncor2
Nuclear receptor corepressor 2.
    
 0.710
ncor1
Nuclear receptor corepressor 1.
    
 0.710
LOC101071742
Cytochrome P450, family 2, subfamily R, polypeptide 1; Belongs to the cytochrome P450 family.
   
 0.708
LOC101062641
Cytochrome P450, family 27, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
    
 0.661
LOC101064914
Retinoid x receptor, beta b.
   
 0.651
LOC101079168
Uncharacterized protein.
   
 0.651
RXRB
Uncharacterized protein.
   
 0.651
rxra
Retinoid X receptor, alpha a.
   
 0.651
LOC101061209
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
   
 
 0.649
LOC101077963
Cytochrome P450, family 24, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
    
 0.633
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.