Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101071677Ligand of numb-protein X 2b. (683 aa)    
Predicted Functional Partners:
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.634
Crb3
Uncharacterized protein.
    
 0.634
rps27a
Ribosomal protein S27a.
    
  0.626
LOC101072775
5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1.
    
 
 0.614
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.605
mpp5
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
   
 0.586
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
   
 0.586
rbm46
Membrane protein, palmitoylated 7a (MAGUK p55 subfamily member 7); Belongs to the MAGUK family.
   
 0.586
ENSTRUP00000061931
annotation not available
   
 0.586
LOC101064611
Membrane protein, palmitoylated 3b (MAGUK p55 subfamily member 3); Belongs to the MAGUK family.
   
 0.586
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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