Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H2TXA3_TAKRUZinc finger protein 512. (365 aa)    
Predicted Functional Partners:
gtf3c4
General transcription factor IIIC, polypeptide 4.
    
 0.878
gtf3c3
General transcription factor IIIC, polypeptide 3.
    
 0.876
GTF3C5
Uncharacterized protein.
   
 0.873
gtf3c1
B-block_TFIIIC domain-containing protein.
   
 0.848
LOC101061819
Tyrosine-protein kinase.
    
 0.716
polr2h
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
 0.697
LOC101074167
WD_REPEATS_REGION domain-containing protein.
    
 0.614
rbbp4
Retinoblastoma binding protein 4.
    
 0.614
polr3a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.606
rexo4
REX4 homolog, 3'-5' exonuclease.
    
 
 0.583
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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